From: DimitryASuplatov (genesup_at_gmail.com)
Date: Sun Mar 28 2010 - 04:28:52 CDT
Hello,
I am using namd2.7b1in AMBER mode. I have the input amber topology and
parameter files, output dcd trajectory and log files written with one
timestep.
How do I calculate energy between two atoms I select for each time
frame during my trajectory?
Thank you.
SDA
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