Re: The MD of aquaporin in NAMD

From: Axel Kohlmeyer (
Date: Sat Nov 14 2009 - 09:52:05 CST

2009/11/14 Ning Zhang <>:
> I'm doing research about the water through membrane with VMD. I want to set
> aquaporin-1 to the membrane, but how to do this.
> Which center should I choose? Is it at the center of mass of the aquaporin?

your question is impossible to answer.

which center of what are you talking about and in what context?

please remember, that people on mailing lists in general are no mind readers. ;)

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Dr. Axel Kohlmeyer
Institute for Computational Molecular Science
College of Science and Technology
Temple University, Philadelphia PA, USA.

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