From: Rajiv Abhyankar (rajiv.abhyankar_at_gmail.com)
Date: Tue Sep 22 2009 - 17:56:19 CDT
Thank you all of you for your responses..this has actually made my life much
simpler..
On Tue, Sep 22, 2009 at 11:56 PM, Rajiv Abhyankar <rajiv.abhyankar_at_gmail.com
> wrote:
> Hello all, I have been using the NAMD software for running SMD simulations.
> Once I run the simulation, the program generates 4 files - .xsc , .coor ,
> .dcd and .vel right? Suppose I want to follow a particular dihedral angle
> through the simulation. When the simulation is running I know how to do this
> using the Tcl script. But is there a way in which I can extract that
> information or any other such information ( like bond lengths, etc.) after
> the simulation is finished? I was thinking on the lines of writing the
> TclForces script inside the coorfile command but that does not seem to
> work.Could you please help me out with this? Rajiv Abhyankar
>
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