From: liupeng012 (liupeng012_at_mail.nankai.edu.cn)
Date: Thu Jun 04 2009 - 00:10:32 CDT
hi!
everyone!
i hear that the namd2.7b1 is faster than before. so i want to have a try!
1 build charm++
./build charm++ net-linux-x86_64 iccstatic pxshm ibverbs ifort -j16 -O2 -DCMK_OPTIMIZE
2 build namd
./config Linux-x86_64-icc --charm-arch net-linux-x86_64-ibverbs-ifort-iccstatic
3 run namd
./charmrun ./namd +p32 ++nodelist $nodelist $.conf > $.log
but ,after run 60000 step. it terminated ,the error message is as follow. what is wrong?
what should i do?? recompile it ?? it seems not work!
[10] Stack Traceback:
[0] /hptc_cluster/NAMD/NAMD-2.7_CVS/Linux-x86_64-icc-posix/namd2 [0xa34334]
[1] /hptc_cluster/NAMD/NAMD-2.7_CVS/Linux-x86_64-icc-posix/namd2 [0xa37514]
[2] CcdRaiseCondition+0x1c3 [0xa505b9]
[3] CsdScheduler+0x488 [0xa490bc]
[4] _ZN7BackEnd4initEiPPc+0x24a [0x4e53a6]
[5] main+0x5f [0x4dc86b]
[6] __libc_start_main+0xf4 [0x346cc1d8b4]
[7] _ZNSt8ios_base4InitD1Ev+0x41 [0x4d7749]
2009-06-04
liupeng012
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