How can I find topology and parameter files for heterocyclic, heteroaromatic, halogens and sugar compounds

From: Lisa Brown (lisa.brown2009_at_gmail.com)
Date: Fri Feb 27 2009 - 11:02:51 CST

Hi all

I want to do MD of few complex systems (heterocyclic, heteroaromatic ,
halogens and sugars containing ligand-protein complexes) using NAMD.
How can I find topology and parameter files for the heterocyclic,
heteroaromatic , halogens and sugar compounds?
How can I combine them with protein topology and parameter files?

I highly appreciate your suggestions.

thank you in advance
Lisa

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:52:25 CST