Re: Creating bonds during a run

From: Axel Kohlmeyer (akohlmey_at_cmm.chem.upenn.edu)
Date: Mon Jan 12 2009 - 10:09:24 CST

On Mon, 12 Jan 2009, Marcin S. wrote:

MS> Hello,
MS>  

MS> Is there any way to create bonds during a NAMD run? Or, is it
MS> possible to "glue" two particles together during a run?

how about adding a restraint and cranking up the force
constant during the run?

cheers,
   axel.

MS>  
MS> Thanks,
MS> Marcin S.

-- 
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Axel Kohlmeyer   akohlmey_at_cmm.chem.upenn.edu   http://www.cmm.upenn.edu
   Center for Molecular Modeling   --   University of Pennsylvania
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