Re: how to run namd2.7b1 on multiple nodes

From: Roman Petrenko (rpetrenko_at_gmail.com)
Date: Fri Jul 24 2009 - 11:13:22 CDT

sorry for confusion, my command actually works fine, it's just a
message in log file "Found 3 config files" which should be ignored.
All other permutations of charmrun arguments lead to wrong results.
So, i assume the format is:

charmrun <full path namd2> <config file> <extra options>

On Thu, Jul 23, 2009 at 6:48 PM, Roman Petrenko<rpetrenko_at_gmail.com> wrote:
> Dear all,
>
> is ++nodelist flag obsolete in namd2.7b1?
>
> for namd2.6 i used the following command to run NAMD, but in namd2.7b1
> in the log file it says "found 3 config files...", where $fconf is
> config file
> charmrun $namddir/namd2 $fconf ++nodelist $nodelist +p$np
>
> note, that locally something like:
> charmrun -np $np namd2 $fconf
>
> runs perfectly
> --
> Roman Petrenko
> Physics Department
> University of Cincinnati
>
>

-- 
Roman Petrenko
Physics Department
University of Cincinnati

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