Re: namdcvs

From: Achani.K.Yatawara_at_Dartmouth.edu
Date: Mon Jan 05 2009 - 13:32:34 CST

Thank you Chris and Leo for the comments, your valuable time and attention.

I followed the notes.txt. I did followings in order to compile namdcvs,

1. charm ++ 6.0 (I got from
http://charm.cs.uiuc.edu/download/downloads.phtml- test run was
successful)

2. namdcvs (I followed the web guide "Bleeding-Edge (straight from
CVS, requires Charm++ 6.0 or newer)

Request and receive a username and password from us.

Run or add the following to your login scripts (replace "username"):
alias namdcvs 'cvs -d :pserver:username_at_cvs.ks.uiuc.edu:/namd/cvsroot'

  namdcvs login (enter your password)

In a directory that doesn't already contain a file or directory named namd2:
namdcvs checkout namd2

  namdcvs logout ")

3. tcl and fftw for linux-amd64 (got from
http://www.ks.uiuc.edu/Research/namd/libraries/ )

Then I edit the Make.charm, Linux-amd64.tcl and Linux-amd64.fftw
configuartion files giving paths to files.

then I did the following ,

  ./config tcl fftw Linux-amd64-g++
cd Linux-amd64-g++
make

However I could not compile, and got an error massage at the end.
last few lines of the massage, (full massage is attached)
charm-6.0/net-linux-amd64/bin/../lib/libthreads-default.o -lck
-lconv-cplus-y -lconv-core -lconv-util -lckqt -ldl -ltcl8.3 -ldl
-lsrfftw -lsfftw -lm -lmoduleNeighborLB -lmodulecommlib -lm returned
error code 1
charmc exiting...
rm -f moduleinit18447.C moduleinit18447.o
make: *** [namd2] Error 1

All your suggestions are highly appreciated.

Thank you in advance for your attention and time
Achani


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