From: Tianjiao Wang (tjwang_at_iastate.edu)
Date: Tue Dec 30 2008 - 15:54:31 CST
I have finished a molecular dynamics simulation of a small RNA by NAMD 2.6.
I am wondering whether there is a way to quantify the occupancy of base
stackings between residues from the MD trajectory. Thank you very much for
your advice and happy holiday!
Iowa State Univ
Ames, IA 50010
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