Re: How to compute interaction energies between individual amino acid residues

From: harish vashisth (harish.vashisth_at_gmail.com)
Date: Tue Sep 30 2008 - 12:34:53 CDT

Use 'NAMDENERGY' plugin. Read plugin documentation.

Harish

On Tue, Sep 30, 2008 at 12:24 PM, Jemmy Hu <j8hu_at_sciborg.uwaterloo.ca>wrote:

> Hello,
>
> We have a NAMD user who asked this question:
>
> "When using the NAMD simulation software, is there a way to compute
> interaction energies between individual amino acid residues, and if
> so, how do I do this?"
>
> a sample input file is appreciated.
>
> Thanks,
> Jemmy
>
>
>
>

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