Re: Warning in log file

From: Axel Kohlmeyer (akohlmey_at_cmm.chem.upenn.edu)
Date: Wed Aug 06 2008 - 11:17:34 CDT

On Wed, 6 Aug 2008, tinni sona wrote:

TS> Hi,
TS>
TS> My system contains 34535 number of atoms and 10825 residues. The log
TS> file of my simulation is showing the following warning:
TS>
TS> Warning: Man, tiny Elvis, that number is huge!
TS> Warning: We don't know how X-Plor represents over Z999 residues
TS> Warning: And you just tried - so we'll fake it as -55000
TS> Warning: This is reversible, but only inside this program.
TS>
TS> Will it cause any problem in the simulation? I mean will the
TS> trajectory be affected for this warning?
TS> Please suggest.

it should not. but you should be able to avoid it
by splitting your system into segments where each
can start the residue counter fresh from 1.

cheers,
   axel.

TS>
TS> Thanks,
TS> Madhurima.
TS>

-- 
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Axel Kohlmeyer   akohlmey_at_cmm.chem.upenn.edu   http://www.cmm.upenn.edu
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