Re: Temperature problem

From: Jerome Henin (jhenin_at_cmm.chem.upenn.edu)
Date: Tue Feb 13 2007 - 14:42:55 CST

Dear Ahlam,
Take the NAMD manual, and make sure you understand what each parameter in your
config file does. After that, if you still have a question, you are welcome
to ask it on this list.

Best,
Jerome

On Tuesday 13 February 2007 15:05, Al-Rawi, Ahlam wrote:
> Dear NAMD user,
> I am working on MD simulations of membrane channel. Now I am running
> NVT with constrain on the backbone atoms of the pore (made with five
> peptides)
> I assign the temperature to be 310 K, The output average value of the
> Temperature that I got is around 9 K. the conf file is attached, I need
> your help.
> Thanks
> Ahlam
>
> -

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