psfgen for pre-equilibrated membrane bilayer

From: Myunggi Yi (myunggi_at_gmail.com)
Date: Wed Dec 19 2007 - 18:47:10 CST

Dear namd users,

I'm a beginner of NAMD.
I'm trying to prepare psf file for pre-equilibrated popc membrane bilayer
(128; 64 lipids each layer).

Should I split all lipid molecules using vmd?
I want to make three segments (fragments) with upper leaflet and lower
leaflet and water molecules.
How can I do this?

Have a nice day.

-- 
Best wishes,
MYUNGGI YI
==================================
KLB 419
Institute of Molecular Biophysics
Florida State University
Tallahassee, FL 32306
Office: (850) 645-1334
http://www.scs.fsu.edu/~myunggi

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:45:42 CST