Re: saving the coordinates for huge trajectory file

From: JC Gumbart (gumbart_at_ks.uiuc.edu)
Date: Fri Nov 09 2007 - 12:08:39 CST

Is it possible you're running out of memory? You could perhaps load
1000 frames at a time and write them to pdbs (0 - 999, 1000 - 1999,
etc.). But are you sure you want 10000 pdb files?

On Nov 6, 2007, at 11:19 PM, ramya narasimhan wrote:

> Hi all,
> I have a dcd file of 10000 frames. I tried to save the
> trajectories in PDB format using VMD but it writes only 1000
> frames.I don't know whether anything wrong with my way or is there
> any criteria that VMD can handle only limited number of frames? Can
> anyone please help me to sort this out?
>
> Thanks in advance
> Ramya.L.
>
> Why delete messages? Unlimited storage is just a click away.

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