Initial and final state fix MD

From: Ugur Akgun (ugur_iowa_at_hotmail.com)
Date: Thu Oct 04 2007 - 16:21:25 CDT

Dear All;
I have two positions of a small peptide. I want to simulate the steps between .
Is there any way to run MD simulation with known beginning and end configurations?
This is not like pulling few atoms..
Can NAMD do this?
I'd really appreciate any help.
Thanks a lot.
Cheers

_________________________________________________________________
Peek-a-boo FREE Tricks & Treats for You!
http://www.reallivemoms.com?ocid=TXT_TAGHM&loc=us

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:45:20 CST