From: L. Michel Espinoza-Fonseca (mef_at_ddt.biochem.umn.edu)
Date: Tue Aug 07 2007 - 09:09:19 CDT
Dear Qiang,
Both topologies and parameters can be found in the stream folder of
the latest version of the CHARMM ff. The file you'll need is
"toppar_prot_na_all" (it contains both topologies and parameters).
Good luck!
Michel
2007/8/7, Qiang Zhong <zqiang320_at_webmail.hzau.edu.cn>:
> Dear NAMD users:
> I have a phosphorylated THR that need to be parameter, I can find .top
> file of THP in charmm force field, but I could not find .prm file in it.
> Could somebody tell me where to find it or how to construct it?
>
> Thank you very much!
>
>
>
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