Re: Incorrect Atom Count

From: vivek behera (beheravivek_at_yahoo.com)
Date: Tue Mar 13 2007 - 23:22:16 CDT

• Next message: Xiuping Tao: "non-parallel NAMD compilation"
• Previous message: hl332_at_drexel.edu: "protein spinning and total enegy not constant in NVE"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

No, my minimized .coor file is a bincoordinate file. I am actually not using the tutorial but am running a different simulation. I would appreciate any other help on this error:

FATAL ERROR: Incorrect atom count in binary file
dppcca_min.coor
Stack Traceback:
  [0] _Z17read_binary_coorsPcP3PDB+0x3d [0x827c80d]
  [1]
_ZN9NamdState14configListInitEP10ConfigList+0x72f
[0x827b02b]
  [2] _ZN9ScriptTcl9initcheckEv+0x5e [0x82ba15e]
  [3] _ZN9ScriptTcl3runEPc+0xaa [0x82b6ce6]
  [4] main+0x1d6 [0x80df36a]
  [5] __libc_start_main+0xd3 [0xb89e23]
  [6] dlopen+0x41 [0x80dbc41]

--Thanks

 
---------------------------------
Sucker-punch spam with award-winning protection.
 Try the free Yahoo! Mail Beta.

• Next message: Xiuping Tao: "non-parallel NAMD compilation"
• Previous message: hl332_at_drexel.edu: "protein spinning and total enegy not constant in NVE"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:44:27 CST