From: Viral D. Tejani (vdt204_at_lehigh.edu)
Date: Sat Feb 24 2007 - 19:47:23 CST
I am an undergraduate Chemical Engineering major at Lehigh University in
I am performing research that involves NAMD / VMD, where I am working
with an integrin/collagen complex. I want to perform a simulation where
I can apply a varying force over time. I have done constant force and
constant velocity simulations by modifying files as show in the NAMD
Tutorial. However, the tutorial make no reference to how to apply a
varying force on a molecule.
Is such a thing possible with NAMD? If so, how can I modify my files to
add a parameter for varying force?
Any help is appreciated.
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