From: youbin tu (youbint_at_gmail.com)
Date: Tue Nov 28 2006 - 23:00:41 CST
Hi all:
When loading a membrane, which has 50318atoms. The vmd command
screen gave some error and warning message such as:
ERROR> Residue exceeded maximum number of bonds <4>
...................
Warning) Unusual bond between residues 2399 and 1
.....................
Although, it looks like the molecule is very well shown in the VMD
display window, but I still doubt whether the errors can bring
troubles to the coming simulations using NAMD?
In fact, my NAMD simulation really broke down when I initiate an
MD simulation. So I have to trace back each step from the beginning.
I really appreciate it if sb can give me some suggestions.
yt
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