From: Elsa S. Henriques (Henriques_at_fias.uni-frankfurt.de)
Date: Tue Sep 05 2006 - 08:42:29 CDT
In CHARMM, DPPC is built from PALM and PCGL residues via patches EST1 and
I am sending a CHARMM coordinate file (VMD reads it) in attachment; it has
the DPPC atoms named according to corresponding CHARMM topology residues.
You can start from there ...
Hope it helps,
On Mon, September 4, 2006 6:27 pm, Lechuga, Javier said:
> I am looking for a Pdb file for a single DPPC lipid I could use into NAMD
> software. I have found one over internet but it seems to need to be
> rebuilt into NAMD topology files (See file attached).
> Could someone pass me one of those or show me how could I modified the one
> attached in oder to use it with NAMD topology files?
> Thank you
-- Elsa S. Henriques, Ph.D. Frankfurt Institute for Advanced Studies Tel: +49 (0)69 798 47502 Max von Laue Str. 1, room 1.215 Fax: +49 (0)69 798 47611 60438 Frankfurt am Main, Germany E-mail: Henriques_at_fias.uni-frankfurt.de http://www.fias.uni-frankfurt.de/home/solovyov/MEMBERS/henriques.html .-. .-. .-. .-. .-. .-. .-. .-. .-. .-. X|||\ /|||X|||\ /|||X|||\ /|||X|||\ /|||X|||\ /|||X.-. .-. \|||X|||/ "There is no gene for the human spirit" |||\ /|||X `-' `-' \|||X|||/ \|||X|||/ \|||X|||/ \|||X|||/ \|||X|||/ `-' `-' `-' `-' `-' `-' `-' `-' `-' `-' in Gattaca(1997)
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