Re: Pulling of Center of Mass

From: JC Gumbart (gumbart_at_ks.uiuc.edu)
Date: Tue Aug 15 2006 - 13:43:07 CDT

The Steered Molecular Dynamics (SMD) feature of NAMD does exactly
what you require. It is described in detail here: http://
www.ks.uiuc.edu/Research/namd/2.6b1/ug/node32.html

Please let us know if this is sufficient for your purpose.

On Aug 15, 2006, at 10:44 AM, Rahul Bhowmik wrote:

> Hi All,
> I want to pull the center of mass of a biopolymer with constant
> velocity.
> Can anyone explain me how to proceed in order to perform this. I would
> appreciate any explanation regarding this.
>
> Thanks
>
> Kind Regards
> Rahul Bhowmik
> Grad Research Assistant,
> Department of Civil Engineering,
> North Dakota State University,
> Fargo, ND-58105.
> Phone :- 701-231-6275 (O)
> 701-231-4208 (R
>

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