CMAP in NAMD simulation

From: Neelanjana Sengupta (senguptan_at_gmail.com)
Date: Sat Oct 14 2006 - 17:26:23 CDT

Hello NAMD experts,

The NAMD 2.6 manual says that " Both NAMD and psfgen (standalone or VMD
plug) read and interpret the new CHARMM 31 stream files (combining topology
and parameters) and the new CMAP crossterm (dihedral-dihedral) potential
function."

Could you tell me how I can implement CMAP can be implemented into a NAMD
simulation of a protein or peptide? (ie. what is the format of input file,
etc?)

Thanks,

Neelanjana Sengupta
****************************
Graduate Student
Dept. of Chemistry
Univ. of California-Irvine,
Irvine, CA 92617
USA

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