From: Ugur Akgun (ugur_iowa_at_hotmail.com)
Date: Fri Sep 15 2006 - 16:50:14 CDT
Hi I am trying to install NAMD from source to Xeon 64 cluster, I did these
steps, and got the error about missing charm++.h, I'd appreciate any help.
- I got amd64 versions of fftw and tcl
- I built the charm with this command;
./build charm++ net-linux-amd64 --no-build-shared -O -DCMK_OPTIMIZE=1
-Then I tried on NAMD; but it did not work;
[uakgun_at_frontend NAMD_2.6_Source]$ ./config tcl fftw Linux-amd64-g++
[uakgun_at_frontend NAMD_2.6_Source]$ cd Linux-amd64-g++/
[uakgun_at_frontend NAMD_2.6_Source]$ make
mkdir inc
mkdir obj
g++
-I/home/uakgun/SOFTWARE/MODIFIED_NAMD_2_6b1/NAMD_2.6_Source/charm-5.9/net-linux-amd64/include
-DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -I
/home/uakgun/SOFTWARE/MODIFIED_NAMD_2_6b1/tcl/linux-amd64/include
-I/home/uakgun/tcl/include -DNAMD_TCL
-I/home/uakgun/SOFTWARE/MODIFIED_NAMD_2_6b1/f
ftw/linux-amd64/include -I/home/uakgun/fftw/include -DNAMD_FFTW
-DNAMD_VERSION=\"2.6\" -DNAMD_PLATFORM=\"Linux-amd64\" -O3 -m64
-fexpensive-optimiz
ations -ffast-math -o obj/common.o -c src/common.C
src/common.C:22:21: charm++.h: No such file or directory
src/common.C: In function `void NAMD_quit(const char*)':
src/common.C:67: error: `CkPrintf' undeclared (first use this function)
src/common.C:67: error: (Each undeclared identifier is reported only once
for each function it appears in.)
src/common.C:69: error: `CmiAbort' undeclared (first use this function)
src/common.C: In function `void NAMD_die(const char*)':
src/common.C:80: error: `CkPrintf' undeclared (first use this function)
src/common.C:82: error: `CmiAbort' undeclared (first use this function)
src/common.C: In function `void NAMD_err(const char*)':
src/common.C:95: error: `CkPrintf' undeclared (first use this function)
src/common.C:97: error: `CmiAbort' undeclared (first use this function)
src/common.C: In function `void NAMD_bug(const char*)':
src/common.C:110: error: `CkPrintf' undeclared (first use this function)
src/common.C:112: error: `CmiAbort' undeclared (first use this function)
make: *** [obj/common.o] Error 1 "
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