From: Elsa S. Henriques (Henriques_at_fias.uni-frankfurt.de)
Date: Tue Sep 05 2006 - 08:42:29 CDT
Hi,
In CHARMM, DPPC is built from PALM and PCGL residues via patches EST1 and
EST2.
I am sending a CHARMM coordinate file (VMD reads it) in attachment; it has
the DPPC atoms named according to corresponding CHARMM topology residues.
You can start from there ...
Hope it helps,
Elsa
On Mon, September 4, 2006 6:27 pm, Lechuga, Javier said:
> Hello,
>
> I am looking for a Pdb file for a single DPPC lipid I could use into NAMD
> software. I have found one over internet but it seems to need to be
> rebuilt into NAMD topology files (See file attached).
>
> Could someone pass me one of those or show me how could I modified the one
> attached in oder to use it with NAMD topology files?
>
> Thank you
>
--
Elsa S. Henriques, Ph.D.
Frankfurt Institute for Advanced Studies Tel: +49 (0)69 798 47502
Max von Laue Str. 1, room 1.215 Fax: +49 (0)69 798 47611
60438 Frankfurt am Main, Germany
E-mail: Henriques_at_fias.uni-frankfurt.de
http://www.fias.uni-frankfurt.de/home/solovyov/MEMBERS/henriques.html
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