NAMD on TeraGrid: OpenMP?

From: a-yermakova_at_northwestern.edu
Date: Thu Jul 13 2006 - 12:43:53 CDT

('binary' encoding is not supported, stored as-is) I am starting to run simulations on the TeraGrid. Can anyone suggest if we should use only one
instance of the simulation on each multi processor node or the number of instances be equal to the
number of processors? Basically, the question boils down to: has OpenMP been used in NAMD or is
NAMD solely MPI?

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