Time of MD

From: edu (edu_at_cecam.sld.cu)
Date: Fri Jun 30 2006 - 11:18:16 CDT

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Hello

When I run a MD simulation on 1 PC (using namd) the time involve in the process is lower than if I use 2 PC with Charmrun soft. ¿It is possible?

The simulation is:

A protein in a water box (9250 total atoms). The PCs are connected in a window network but the time is :

using 1 PC(localhost): WallClock: 497.609009 CPUTime: 497.608002 Memory: 0 kB
using 2 PC(Windows Network): WallClock: 562.856018 CPUTime: 562.854980 Memory: 0 kB

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