From: prodakt_at_o2.pl
Date: Wed Oct 12 2005 - 06:21:53 CDT
subscribe namd-l
Good morning!
I have some problem with producing namd2 binary files. All steps
from install instruction all correct, just the last step makes errors:
/usr/bin/ld: cannot find -libtcl8.3.a
collect2: ld returned 1 exit status
Fatal Error by charmc in directory
/home/prodakt/programs/namd_vmd/namd/NAMD_2.6b1_Source/Linux-i686-g++
Command g++ -Wl,--allow-multiple-definition -rdynamic
-L/home/prodakt/programs/namd_vmd/namd/fftw/linux/lib
-I/home/prodakt/programs/namd_vmd/namd/NAMD_2.6b1_Source/charm-5.9/net-linux/include
-DCMK_OPTIMIZE=1 -Iinc -Isrc -O3 -march=pentiumpro -ffast-math
-static -o namd2
-L/home/prodakt/programs/namd_vmd/namd/NAMD_2.6b1_Source/charm-5.9/net-linux/bin/../lib
-I/home/prodakt/programs/namd_vmd/namd/NAMD_2.6b1_Source/charm-5.9/net-linux/bin/../include
/home/prodakt/programs/namd_vmd/namd/NAMD_2.6b1_Source/charm-5.9/net-linux/bin/../lib/libldb-rand.o
obj/buildinfo.o obj/common.o obj/dcdlib.o obj/erf.o obj/main.o
obj/mainfunc.o obj/memusage.o obj/strlib.o obj/AlgSeven.o
obj/AlgRecBisection.o obj/AlgNbor.o obj/AtomMap.o obj/BackEnd.o
obj/BroadcastMgr.o obj/BroadcastClient.o obj/CollectionMaster.o
obj/CollectionMgr.o obj/Communicate.o obj/Compute.o
obj/ComputeAngles.o obj/ComputeBonds.o obj/ComputeConsForce.o
obj/ComputeConsForceMsgs.o obj/ComputeCylindricalBC.o
obj/ComputeDihedrals.o obj/ComputeDPME.o obj/ComputeDPMEMsgs.o
obj/ComputeDPMTA.o obj/ComputeEField.o obj/ComputeExt.o
obj/ComputeFullDirect.o obj/ComputeHomePatch.o
obj/ComputeHomePatches.o obj/ComputeImpropers.o obj/ComputeGlobal.o
obj/ComputeGlobalMsgs.o obj/ComputeMap.o obj/ComputeMgr.o
obj/ComputeNonbondedSelf.o obj/ComputeNonbondedPair.o
obj/ComputeNonbondedUtil.o obj/ComputeNonbondedStd.o
obj/ComputeNonbondedFEP.o obj/ComputeNonbondedLES.o
obj/ComputePatch.o obj/ComputePatchPair.o obj/ComputePme.o
obj/ComputeRestraints.o obj/ComputeSphericalBC.o obj/ComputeStir.o
obj/ComputeTclBC.o obj/ConfigList.o obj/Controller.o
obj/ccsinterface.o obj/DataStream.o obj/DumpBench.o
obj/FreeEnergyAssert.o obj/FreeEnergyGroup.o obj/FreeEnergyLambda.o
obj/FreeEnergyLambdMgr.o obj/FreeEnergyParse.o
obj/FreeEnergyRestrain.o obj/FreeEnergyRMgr.o obj/FreeEnergyVector.o
obj/GlobalMaster.o obj/GlobalMasterServer.o obj/GlobalMasterTest.o
obj/GlobalMasterIMD.o obj/GlobalMasterTcl.o obj/GlobalMasterSMD.o
obj/GlobalMasterFreeEnergy.o obj/GlobalMasterEasy.o
obj/GlobalMasterMisc.o obj/GromacsTopFile.o obj/heap.o
obj/HomePatch.o obj/IMDOutput.o obj/InfoStream.o
obj/LdbCoordinator.o obj/LJTable.o obj/Measure.o obj/MStream.o
obj/MigrateAtomsMsg.o obj/Molecule.o obj/NamdCentLB.o
obj/NamdNborLB.o obj/NamdState.o obj/NamdOneTools.o obj/Node.o
obj/Output.o obj/Parameters.o obj/ParseOptions.o obj/Patch.o
obj/PatchMgr.o obj/PatchMap.o obj/PDB.o obj/PDBData.o obj/PmeBase.o
obj/PmeKSpace.o obj/PmeRealSpace.o obj/ProcessorPrivate.o
obj/ProxyMgr.o obj/ProxyPatch.o obj/Rebalancer.o obj/RecBisection.o
obj/ReductionMgr.o obj/RefineOnly.o obj/ScriptTcl.o obj/Sequencer.o
obj/Set.o obj/Settle.o obj/SimParameters.o obj/Sync.o
obj/TclCommands.o obj/WorkDistrib.o obj/pub3dfft.o obj/vmdsock.o
obj/parm.o obj/imd.o obj/dcdplugin.o moduleinit10024.o
-lmoduleNeighborLB -lmodulecommlib
/home/prodakt/programs/namd_vmd/namd/NAMD_2.6b1_Source/charm-5.9/net-linux/bin/../lib/libmemory-default.o
/home/prodakt/programs/namd_vmd/namd/NAMD_2.6b1_Source/charm-5.9/net-linux/bin/../lib/libthreads-default.o
-lck -lconv-cplus-y -lconv-core -lconv-util -lm -lckqt -ldl -lz
-libtcl8.3.a -libtclstub8.3.a -libsfftw.a -libsrfftw.a -libsfftw.la
-libsrfftw.la -lm -lmoduleNeighborLB -lmodulecommlib returned error
code 1
charmc exiting...
rm -f moduleinit10024.C moduleinit10024.o
make: *** [namd2] Error 1
The path name is for sure correct, and lib names are also correct.
I'm working with Linux RedHat Enterprise 4 i386.
Thankyou
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