hard wall

From: Mauricio Carrillo Tripp (trippm_at_gmail.com)
Date: Thu Jun 23 2005 - 11:24:00 CDT

• Next message: Joshua D. Moore: "Zeros at the beginning of each line in the output"
• Previous message: akash.khandelwal_at_ndsu.edu: "electron density profiles (EDP)"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

Hi all,
Is there a way to set a hard wall in a simulation?
I'm thinking of something similar to the shape of
an ion channel's pore, so I can use this instead of the
explicit protein. I've seen simulations of KcsA done this way
but I don't think they use NAMD and I was wondering
if I could do something similar with NAMD. Thanks.

-- 
Mauricio Carrillo Tripp, PhD
Department of Chemistry
Wabash College
trippm_at_wabash.edu
http://chem.acad.wabash.edu/~trippm

• Next message: Joshua D. Moore: "Zeros at the beginning of each line in the output"
• Previous message: akash.khandelwal_at_ndsu.edu: "electron density profiles (EDP)"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:40:53 CST