- s -
- sampleTableTex()
: ComputeBondedCUDAKernel.cu
, CudaComputeNonbondedKernel.cu
- scalar_sum()
: CudaPmeSolverUtilKernel.h
, CudaPmeSolverUtilKernel.cu
- scalar_sum_kernel()
: CudaPmeSolverUtilKernel.cu
- scale_coordinates()
: PmeBase.inl
- scale_forces()
: PmeBase.inl
- send_build_cuda_force_table()
: ComputeNonbondedCUDA.C
, ComputeNonbondedUtil.C
- send_dgram()
: main.C
- sendReplicaDcdAck()
: DataExchanger.C
, DataExchanger.h
- sendReplicaDcdData()
: DataExchanger.C
, DataExchanger.h
- sendReplicaDcdInit()
: DataExchanger.h
, DataExchanger.C
- set_macro()
: ParseOptions.C
- SetEqual()
: FreeEnergyVector.C
- setPatchNumLists_findEmptyPatches()
: CudaTileListKernel.cu
- settle1()
: Settle.C
, Settle.h
- settle1_SIMD()
: Settle.C
, Settle.h
- settle1_SIMD< 1 >()
: Settle.C
- settle1_SIMD< 2 >()
: Settle.C
- settle1init()
: Settle.C
, Settle.h
- settle2()
: Settle.h
, Settle.C
- settlev()
: Settle.C
- setup_bin_data()
: msm_shortrng.c
, msm_shortrng_sprec.c
- setup_bins_1away()
: msm_setup.c
- setup_bins_k_away()
: msm_setup.c
- setup_cell_vectors()
: msm_setup.c
- setup_grids()
: msm_setup.c
- setup_hgrid_1d()
: msm_setup.c
- setupSortKey()
: CudaTileListKernel.cu
- shuffleNext()
: CudaComputeGBISKernel.cu
, CudaComputeNonbondedKernel.cu
- SIMPARAM()
: DumpBenchParams.h
- simple_set_macro()
: ParseOptions.C
- sizeof_element()
: packmsg.h
- slave_init()
: BackEnd.C
- sortAtomsForCUDA()
: SortAtoms.h
, SortAtoms.C
- sortAtomsForPatches()
: SortAtoms.h
, SortAtoms.C
- sortEntries_bubbleSort()
: ComputeNonbondedInl.h
- sortEntries_mergeSort_v1()
: ComputeNonbondedInl.h
- sortEntries_mergeSort_v2()
: ComputeNonbondedInl.h
- sortEntries_selectionSort()
: ComputeNonbondedInl.h
- sortop_bitreverse()
: CudaComputeNonbonded.C
, ComputeNonbondedCUDA.C
- spatial_hashing()
: msm_shortrng.c
, msm_shortrng_sprec.c
- split()
: MoleculeQM.C
- spread_charge()
: CudaPmeSolverUtilKernel.h
, CudaPmeSolverUtilKernel.cu
- spread_charge_kernel()
: CudaPmeSolverUtilKernel.cu
- storeForces()
: CudaComputeNonbondedKernel.cu
, ComputeBondedCUDAKernel.cu
- storeInReverse()
: CudaTileListKernel.cu
- Strdup()
: ParseOptions.C
- swap4()
: imd.C
- swap_header()
: imd.C