NAMD
GromacsTopFile Member List

This is the complete list of members for GromacsTopFile, including all inherited members.

getAngle(int num, int *atomi, int *atomj, int *atomk, int *angletype) constGromacsTopFile
getAngleParams(int num, Real *th0, Real *kth, int *funct) constGromacsTopFile
getAtom(int num, int *residue_number, char *residue_name, char *atom_name, char *atom_type, int *atom_typenum, Real *charge, Real *mass) constGromacsTopFile
getAtomParams(int num, char *type) constGromacsTopFileinline
getBond(int num, int *atomi, int *atomj, int *bondtype) constGromacsTopFile
getBondParams(int num, Real *b0, Real *kB, int *funct) constGromacsTopFile
getDihedral(int num, int *atomi, int *atomj, int *atomk, int *atoml, int *type) constGromacsTopFile
getDihedralParams(int num, Real *c, int *mult, int *funct) constGromacsTopFile
getExclusions(int *, int *) constGromacsTopFile
getNumAngleParams() constGromacsTopFileinline
getNumAngles() constGromacsTopFile
getNumAtomParams() constGromacsTopFileinline
getNumAtoms() constGromacsTopFile
getNumBondParams() constGromacsTopFileinline
getNumBonds() constGromacsTopFile
getNumDihedralParams() constGromacsTopFileinline
getNumDihedrals() constGromacsTopFile
getNumExclusions() constGromacsTopFile
getNumGaussPair() constGromacsTopFile
getNumLJPair() constGromacsTopFile
getNumPair() constGromacsTopFile
getPairGaussArrays2(int *indexA, int *indexB, Real *gaussA, Real *gaussMu1, Real *gaussSigma1, Real *gaussMu2, Real *gaussSigma2, Real *gaussRepulsive)GromacsTopFile
getPairLJArrays2(int *indexA, int *indexB, Real *pairC6, Real *pairC12)GromacsTopFile
getSystemName() constGromacsTopFileinline
getVDWParams(int typea, int typeb, Real *c6, Real *c12, Real *c6pair, Real *c7) constGromacsTopFile
GromacsTopFile(char *filename)GromacsTopFile