NAMD
ComputeLCPO Member List

This is the complete list of members for ComputeLCPO, including all inherited members.

A12_fComputeNonbondedUtilprivatestatic
A6_fComputeNonbondedUtilprivatestatic
accelMDOnComputeNonbondedUtilprivatestatic
alchDecoupleComputeNonbondedUtilprivatestatic
alchFepOnComputeNonbondedUtilprivatestatic
alchThermIntOnComputeNonbondedUtilprivatestatic
alchVdwShiftCoeffComputeNonbondedUtilprivatestatic
alchWCAOnComputeNonbondedUtilprivatestatic
atomUpdate()ComputeLCPOvirtual
B12_fComputeNonbondedUtilprivatestatic
B6_fComputeNonbondedUtilprivatestatic
basePriorityComputeprotected
c0ComputeNonbondedUtilprivatestatic
c1ComputeNonbondedUtilprivatestatic
C12_fComputeNonbondedUtilprivatestatic
c3ComputeNonbondedUtilprivatestatic
c5ComputeNonbondedUtilprivatestatic
c6ComputeNonbondedUtilprivatestatic
C6_fComputeNonbondedUtilprivatestatic
c7ComputeNonbondedUtilprivatestatic
c8ComputeNonbondedUtilprivatestatic
calc_error(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_fep(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_fullelect_fep(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_fullelect_int(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_int(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_merge_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_merge_fullelect_fep(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_merge_fullelect_fulldisp(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_merge_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_merge_fullelect_int(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_merge_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_merge_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_merge_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_merge_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_slow_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_slow_fullelect_fep(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_slow_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_slow_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_slow_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_slow_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_slow_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_energy_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_merge_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_merge_fullelect_fulldisp(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_merge_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_merge_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_merge_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_merge_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_merge_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_slow_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_slow_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_slow_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_slow_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_slow_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_slow_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_pair_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_fep(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_fullelect_fep(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_fullelect_int(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_int(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_merge_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_merge_fullelect_fep(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_merge_fullelect_fulldisp(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_merge_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_merge_fullelect_int(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_merge_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_merge_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_merge_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_merge_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_slow_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_slow_fullelect_fep(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_slow_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_slow_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_slow_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_slow_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_slow_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_energy_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_merge_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_merge_fullelect_fulldisp(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_merge_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_merge_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_merge_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_merge_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_merge_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_slow_fullelect(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_slow_fullelect_go(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_slow_fullelect_les(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_slow_fullelect_pprof(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_slow_fullelect_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_slow_fullelect_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_tabener(nonbonded *)ComputeNonbondedUtilprivatestatic
calc_self_ti(nonbonded *)ComputeNonbondedUtilprivatestatic
calcFullPairComputeNonbondedUtilprivatestatic
calcFullPairEnergyComputeNonbondedUtilprivatestatic
calcFullSelfComputeNonbondedUtilprivatestatic
calcFullSelfEnergyComputeNonbondedUtilprivatestatic
calcGBIS(nonbonded *params, GBISParamStruct *gbisParams)ComputeNonbondedUtilprivate
calcMergeDispPairComputeNonbondedUtilprivatestatic
calcMergeDispPairEnergyComputeNonbondedUtilprivatestatic
calcMergeDispSelfComputeNonbondedUtilprivatestatic
calcMergeDispSelfEnergyComputeNonbondedUtilprivatestatic
calcMergePairComputeNonbondedUtilprivatestatic
calcMergePairEnergyComputeNonbondedUtilprivatestatic
calcMergeSelfComputeNonbondedUtilprivatestatic
calcMergeSelfEnergyComputeNonbondedUtilprivatestatic
calcPairComputeNonbondedUtilprivatestatic
calcPairEnergyComputeNonbondedUtilprivatestatic
calcSelfComputeNonbondedUtilprivatestatic
calcSelfEnergyComputeNonbondedUtilprivatestatic
calcSlowPairComputeNonbondedUtilprivatestatic
calcSlowPairEnergyComputeNonbondedUtilprivatestatic
calcSlowSelfComputeNonbondedUtilprivatestatic
calcSlowSelfEnergyComputeNonbondedUtilprivatestatic
cidCompute
columnsizeComputeNonbondedUtilprivatestatic
commOnlyComputeNonbondedUtilprivatestatic
Compute(ComputeID)Compute
ComputeLCPO(ComputeID c, PatchID pid[], int t[], ComputeNonbondedWorkArrays *_workArrays, int minPartition, int maxPartition, int numPartitions, int numPatches)ComputeLCPO
ComputeNonbondedUtil()ComputeNonbondedUtilinlineprivate
computeTypeComputeprotected
corr_tableComputeNonbondedUtilprivatestatic
cutoffComputeNonbondedUtilprivatestatic
cutoff2ComputeNonbondedUtilprivatestatic
cutoff2_fComputeNonbondedUtilprivatestatic
cutoff_3ComputeNonbondedUtilprivatestatic
cutoff_3_fComputeNonbondedUtilprivatestatic
cutoff_6ComputeNonbondedUtilprivatestatic
cutoff_6_fComputeNonbondedUtilprivatestatic
dielectric_1ComputeNonbondedUtilprivatestatic
doForce()ComputeLCPOprotectedvirtual
doWork()ComputeLCPOvirtual
drudeNbtholeComputeNonbondedUtilprivatestatic
electEnergyIndex enum valueComputeNonbondedUtilprivate
electEnergyIndex_s enum valueComputeNonbondedUtilprivate
electEnergyIndex_ti_1 enum valueComputeNonbondedUtilprivate
electEnergyIndex_ti_2 enum valueComputeNonbondedUtilprivate
enqueueWork()Computeprotected
ewaldcofComputeNonbondedUtilprivatestatic
exclChecksumIndex enum valueComputeNonbondedUtilprivate
fast_tableComputeNonbondedUtilprivatestatic
finishPatch(int)Computevirtual
fixedAtomsOnComputeNonbondedUtilprivatestatic
forceComputeLCPOprotected
forceBoxComputeLCPOprotected
full_tableComputeNonbondedUtilprivatestatic
fullElectEnergyIndex enum valueComputeNonbondedUtilprivate
fullElectEnergyIndex_s enum valueComputeNonbondedUtilprivate
fullElectEnergyIndex_ti_1 enum valueComputeNonbondedUtilprivate
fullElectEnergyIndex_ti_2 enum valueComputeNonbondedUtilprivate
fullVdwEnergyIndex enum valueComputeNonbondedUtilprivate
gbisP2PatchReady(PatchID, int seq)Computevirtual
gbisP3PatchReady(PatchID, int seq)Computevirtual
gbisPhaseComputeprotected
gbisPhasePriorityComputeprotected
getGBISPhase(void)Computeinline
getNumPatches()Computeinline
goForcesOnComputeNonbondedUtilprivatestatic
goGroPairComputeNonbondedUtilprivatestatic
goMethodComputeNonbondedUtilprivatestatic
goNativeEnergyIndex enum valueComputeNonbondedUtilprivate
goNonnativeEnergyIndex enum valueComputeNonbondedUtilprivate
groGaussEnergyIndex enum valueComputeNonbondedUtilprivate
groLJEnergyIndex enum valueComputeNonbondedUtilprivate
initialize()ComputeLCPOvirtual
invalidPatchComputeLCPOprotected
k_vdwaComputeNonbondedUtilprivatestatic
k_vdwa_fComputeNonbondedUtilprivatestatic
k_vdwbComputeNonbondedUtilprivatestatic
k_vdwb_fComputeNonbondedUtilprivatestatic
lambda_tableComputeNonbondedUtilprivatestatic
lcpoTypeComputeLCPOprotected
lcpoTypeBoxComputeLCPOprotected
ldObjHandleCompute
lesFactorComputeNonbondedUtilprivatestatic
lesOnComputeNonbondedUtilprivatestatic
lesScalingComputeNonbondedUtilprivatestatic
ljTableComputeNonbondedUtilprivatestatic
localWorkMsgCompute
maxPartComputeLCPOprotected
minPartComputeLCPOprotected
molComputeNonbondedUtilprivatestatic
noWork()ComputeLCPOvirtual
numAtomsComputeLCPOprotected
numPartsComputeLCPOprotected
pairInteractionOnComputeNonbondedUtilprivatestatic
pairInteractionSelfComputeNonbondedUtilprivatestatic
pairlistWarningIndex enum valueComputeNonbondedUtilprivate
patchComputeLCPOprotected
patchIDComputeLCPOprotected
patchReady(PatchID, int doneMigration, int seq)Computevirtual
pi_ewaldcofComputeNonbondedUtilprivatestatic
posComputeLCPOprotected
posExtComputeLCPOprotected
positionBoxComputeLCPOprotected
pressureProfileAtomTypesComputeNonbondedUtilprivatestatic
pressureProfileMinComputeNonbondedUtilprivatestatic
pressureProfileOnComputeNonbondedUtilprivatestatic
pressureProfileSlabsComputeNonbondedUtilprivatestatic
pressureProfileThicknessComputeNonbondedUtilprivatestatic
priority(void)Computeinline
qmForcesOnComputeNonbondedUtilprivatestatic
r2_deltaComputeNonbondedUtilprivatestatic
r2_delta_1ComputeNonbondedUtilprivatestatic
r2_delta_expComputeNonbondedUtilprivatestatic
r2_tableComputeNonbondedUtilprivatestatic
reductionComputeLCPOprotected
reductionDataSize enum valueComputeNonbondedUtilprivate
rowsizeComputeNonbondedUtilprivatestatic
scale14ComputeNonbondedUtilprivatestatic
scalingComputeNonbondedUtilprivatestatic
scor_tableComputeNonbondedUtilprivatestatic
select(void)ComputeNonbondedUtilprivatestatic
sequence(void)Computeinline
setNumPatches(int n)Computeinline
slow_tableComputeNonbondedUtilprivatestatic
square(const BigReal &x, const BigReal &y, const BigReal &z)ComputeNonbondedUtilinlineprivatestatic
stepComputeLCPOprotected
submitPressureProfileData(BigReal *, SubmitReduction *)ComputeNonbondedUtilprivatestatic
submitReductionData(BigReal *, SubmitReduction *)ComputeNonbondedUtilprivatestatic
switchOnComputeNonbondedUtilprivatestatic
switchOn2ComputeNonbondedUtilprivatestatic
switchOn_1ComputeNonbondedUtilprivatestatic
switchOn_fComputeNonbondedUtilprivatestatic
table_allocComputeNonbondedUtilprivatestatic
table_enerComputeNonbondedUtilprivatestatic
table_lengthComputeNonbondedUtilprivatestatic
table_noshortComputeNonbondedUtilprivatestatic
table_shortComputeNonbondedUtilprivatestatic
TENSOR enum valueComputeNonbondedUtilprivate
transComputeLCPOprotected
type()Computeinline
v_vdwaComputeNonbondedUtilprivatestatic
v_vdwa_fComputeNonbondedUtilprivatestatic
v_vdwbComputeNonbondedUtilprivatestatic
v_vdwb_fComputeNonbondedUtilprivatestatic
validComputeLCPOprotected
vdw_switch_modeComputeNonbondedUtilprivatestatic
vdwa_tableComputeNonbondedUtilprivatestatic
vdwb_tableComputeNonbondedUtilprivatestatic
vdwEnergyIndex enum valueComputeNonbondedUtilprivate
vdwEnergyIndex_s enum valueComputeNonbondedUtilprivate
vdwEnergyIndex_ti_1 enum valueComputeNonbondedUtilprivate
vdwEnergyIndex_ti_2 enum valueComputeNonbondedUtilprivate
vdwForceSwitchingComputeNonbondedUtilprivatestatic
VECTOR enum valueComputeNonbondedUtilprivate
workArraysComputeLCPOprotected
~Compute()Computevirtual
~ComputeLCPO()ComputeLCPOvirtual
~ComputeNonbondedUtil()ComputeNonbondedUtilinlineprivate