| version 1.8 | version 1.9 |
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| % | % |
| % $RCSfile: ug_colors.tex,v $ | % $RCSfile: ug_colors.tex,v $ |
| % $Author: mbach $ $Locker: $ $State: Exp $ | % $Author: mbach $ $Locker: $ $State: Exp $ |
| % $Revision: 1.8 $ $Date: 2002/10/18 16:05:42 $ | % $Revision: 1.9 $ $Date: 2002/10/18 16:31:04 $ |
| % | % |
| %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| % DESCRIPTION: | % DESCRIPTION: |
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| \label{ug:topic:colordrawing} | \label{ug:topic:colordrawing} |
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| \JMV\ allows you to change the color gradient of the molecule. When selecting a color gradient, \JMV\ uses three colors, a beginning, middle, and end color. The gradient fades from the beginning to the middle, and then from the middle to the end color to create a smooth color gradient. The number of ``in-between'' colors for each gradient is determined by the number of items being colored. For example, if the molecule is colored by index, then each atom gets its own color. If the molecule is colored by residue, each residue type will get its own color. The representations ``Name'' and ``Structure'' have their own color schemes, and are not affected by the color gradients. | \JMV\ allows you to change the color gradient of the molecule. When selecting a color gradient, \JMV\ uses three colors, a beginning, middle, and end color. The gradient fades from the beginning to the middle, and then from the middle to the end color to create a smooth color gradient. The number of ``in-between'' colors for each gradient is determined by the number of items being colored. For example, if the molecule is colored by index, then each atom gets its own color. If the molecule is colored by residue, each residue type will get its own color. The representations ``Name'' and ``Structure'' have their own color schemes, and are not affected by the color gradients. |
| | %%Please note that these changes are only applicable to PDB files, and will not affect VRML files. |
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| To change the color gradient, select ``Color Gradient'' from the ``View'' menu and select one of the choices. The current color gradients are: | To change the color gradient, select ``Color Gradient'' from the ``View'' menu and select one of the choices. The current color gradients are: |
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