Emma Falck
Education
Dr. Sc. (Tech.) (with distinction) in computational
biological and soft condensed matter physics, Helsinki University of Technology, 2005
M. Sc. (Tech.) (with distinction) in computational
statistical/condensed matter physics, Helsinki University of Technology, 2000
Resume
Research Interests
biomolecular complexes
computer simulations
coarse-graining
multiscale modeling
diffusion
biomembranes
soft condensed matter
complex fluids
Publications
- Murtola, T., Falck, E., Rog, T., Karttunen, M., and Vattulainen, I.,
Second-Generation Coarse-Grained Model for Phospholipid/Cholesterol Bilayer,
submitted.
- Falck, E., Rog, T., Karttunen, M., and Vattulainen, I.,
Novel View of Lipid Diffusion in Membranes: From Jumps to Flows,
submitted.
- Murtola, T., Kupiainen, M., Falck, E., and Vattulainen, I.,
Conformational Analysis of Lipid Molecules by Self-Organizing Maps,
J. Chem. Phys. 126, 054707 (2007).
- Patra, M., Hyvonen, M., Falck, E., Sabouri-Ghomi, M., Vattulainen, I., and Karttunen M.,
Long-Range Interactions and Parallel Scalability in Molecular Simulations,
Comp. Phys. Comm. 176, 14 (2007).
- Murtola, T., Rog, T., Falck, E., Karttunen, M., and Vattulainen, I.,
Transient Ordered Domains in Single-Component Phospholipid Bilayers,
Phys. Rev. Lett. 97, 238102 (2006).
- Falck, E., Hautala, J. T., Karttunen, M., Kinnunen, P. J. K., Patra, M., Saaren-Seppala, H., Vattulainen, I., Wiedmer, S. K., and Holopainen J. M.,
Interaction of Fusidic Acid with Lipid Membranes: Implications to the Mechanism of Antibiotic Activity,
Biophys. J. 91, 1787 (2006).
- Falck, E., Patra, M., Karttunen, M., Hyvönen, M. T., and Vattulainen, I.,
Response to the Comment by Almeida et al.: Free Area Theories for Lipid Bilayers - Predictive or Not?,
Biophys. J. 89, 745 (2005).
- Kupiainen, M., Falck, E., Ollila, S., Niemelä, P., Gurtovenko, A. A., Hyvönen, M. T., Patra, M., Karttunen, M., and Vattulainen, I.,
Free Volume Properties of Sphingomyelin, DMPC, DPPC, and PLPC Bilayers,
Journal of Theoretical and Computational Nanoscience 2, 401 (2005).
- Punkkinen, O., Falck, E., Vattulainen, I., and Ala-Nissila, T.,
Dynamics and Scaling of Polymers in a Dilute Solution: Analytical Treatment in Two and Higher Dimensions,
J. Chem. Phys. 122, 094904 (2005).
- Patra, M., Karttunen, M., Hyvönen, M.T., Falck, E., Vattulainen, I.,
Lipid Bilayers Driven to a Wrong Lane in Molecular Dynamics
Simulations by Subtle Changes in Long-Range Electrostatic Interactions,
J. Phys. Chem. B 108, 4485 (2004).
- Falck, E., Patra, M., Karttunen M., Hyvönen, M.T., and Vattulainen I.,
Lessons of Slicing Membranes: Interplay of Packing, Free Area, and Lateral Diffusion in Phospholipid / Cholesterol Bilayers,
Biophys. J. 87, 1076 (2004).
- Falck, E., Lahtinen, J. M., Vattulainen, I., and Ala-Nissila, T.,
Influence of hydorynamics on many-particle diffusion in 2D colloidal suspensions,
Eur. Phys. J. E 13, 267 (2004).
- Falck, E., Patra, M., Karttunen, M., Hyvönen, M.T., and Vattulainen, I.,
Impact of Cholesterol on Voids in Phospholipid Membranes,
J. Chem. Phys. 121, 12676 (2004).
- Murtola, T., Falck, E., Patra, M., Karttunen, M., and Vattulainen, I.,
Coarse-Grained Model for Phospholipid / Cholesterol Bilayers,
J. of Chem. Phys. 121, 9156 (2004).
- Patra, M., Karttunen, M., Hyvönen, M. T., Falck, E., Lindqvist, P., and Vattulainen, I.,
Molecular Dynamics Simulations of Lipid Bilayers: Major Artifacts due to Truncating Electrostatic Interactions,
Biophys. J. 84, 3636 (2003).
- Falck E., Punkkinen O., Vattulainen I., and Ala-Nissila T.,
Dynamics and Scaling of 2D Polymers in a Dilute Solution,
Phys. Rev. E Rapid Comm. 68, 050102(R) (2003).
- Falck, E., Ala-Nissila, T., Granato, E., and Ying, S.-C., Dynamic Scaling in c(2 x 2) Reconstruction on W(001), Surf. Sci. 482-485, 413 (2001).
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