Fatemeh Khalili-Araghi
Home Department:
Physics
Telephone: (217) 244-1733
Office: 3165 Beckman Institute
405 N Mathews,
Urbana, IL 61801
Email:
akhalili@ks.uiuc.edu
Education:
Research Interests:
Publications:
Molecular dynamics investigation of the w-current in the Kv1.2 voltage sensor domains. Fatemeh Khalili-Araghi, Emad Tajkhoshid, Benoit Roux, and Klaus Schulten. Biophysical Journal, 2012, In press.
Constant electric field simulations of the membrane potential illustrated with simple systems. James Gumbart, Fatemeh Khalili-Araghi, Marcos Sotomayor, and Benoit Roux. Biochimica et Biophysica Acta (BBA) - Biomembranes, 1818:294-302, 2011.
Ouabain binding site in a functional Na+/K+ ATPase. Walter Sandtner, Bernhard Egwolf, Fatemeh Khalili-Araghi, Jorge E. Sanchez-Rodriguez, Benoit Roux, Francisco Bezanilla, and Miguel Holmgren. Journal of Biological Chemistry, 286:38177-83, 2011.
Calculation of the gating charge for the Kv1.2 voltage-activated potassium channel. Fatemeh Khalili-Araghi, Vishwanath Jogini, Vladimir Yarov-Yarovoy, Emad Tajkhorshid, Benoit Roux, and Klaus Schulten. Biophysical Journal, 98:2189-2198, 2010.
Molecular dynamics simulations of membrane channels and transporters. Fatemeh Khalili-Araghi, James Gumbart, Po-Chao Wen, Marcos Sotomayor, Emad Tajkhorshid, and Klaus Schulten. Current Opinion in Structural Biology, 19:128-137, 2009.
Dynamics of K+ ion conduction through Kv1.2 . Fatemeh Khalili-Araghi, Emad Tajkhorshid, and Klaus Schulten. Biophysical Journal , 91:L72-L74, 2006.
Free energy calculation from steered molecular dynamics simulations using Jarzynski's equality. Sanghyun Park, Fatemeh Khalili-Araghi, Emad Tajkhorshid, and Klaus Schulten. Journal of Chemical Physics, 119:3559-3566, 2003.
