* This is a reduced version of the CHARMM22 parameter file for * a nanotube simulation in water * BONDS !V(bond) = Kb(b - b0)**2 ! !atom type Kb b0 CA CA 305.000 1.3750 HT HT 0.000 1.5139 OT HT 450.000 0.9572 ANGLES !V(angle) = Ktheta(Theta - Theta0)**2 !V(Urey-Bradley) = Kub(S - S0)**2 ! !atom types Ktheta Theta0 Kub S0 CA CA CA 40.000 120.00 35.00 2.41620 HT OT HT 55.000 104.5200 DIHEDRALS !V(dihedral) = Kchi(1 + cos(n(chi) - delta)) ! !atom types Kchi n delta CA CA CA CA 3.1000 2 180.00 NONBONDED nbxmod 5 atom cdiel shift vatom vdistance vswitch - cutnb 14.0 ctofnb 12.0 ctonnb 10.0 eps 1.0 e14fac 1.0 wmin 1.5 !V(Lennard-Jones) = Eps,i,j[(Rmin,i,j/ri,j)**12 - 2(Rmin,i,j/ri,j)**6] ! !atom ignored epsilon Rmin/2 CA 0.000000 -0.070000 1.992400 HT 0.000000 -0.046000 0.224500 OT 0.000000 -0.152100 1.768200 HBOND CUTHB 0.5 END