# NAMD config file set constraint 10.0 numsteps 1000 structure ../1_build/membrane_hex.psf coordinates ../1_build/membrane_hex.pdb outputName field${constraint} XSTfile field${constraint}.xst bincoordinates eq2.coor extendedSystem eq2.xsc binvelocities eq2.vel langevin on langevinDamping 0.2 langevinTemp 295 langevinHydrogen off switching on switchDist 10 cutoff 12 pairlistdist 14 margin 3 binaryOutput yes binaryRestart yes parameters par_silicon_ions_NEW0.1.inp paraTypeCharmm on wrapAll yes wrapNearest yes COMmotion no outputEnergies 100 outputTiming 100 xstFreq 100 dcdFreq 100 restartFreq 100 timestep 1 nonBondedFreq 2 fullElectFrequency 4 stepsPerCycle 20 Pme on PmeGridSizeX 48 PmeGridSizeY 48 PmeGridSizeZ 128 exclude scaled1-4 1-4scaling 1 constraints on consKCol B consref siliconRest_${constraint}.pdb consKFile siliconRest_${constraint}.pdb eFieldOn On eField 0.0 0.0 16.0