/*****************************************************************************
*
*            (C) Copyright 2005 The Board of Trustees of the
*                        University of Illinois
*                         All Rights Reserved
*
******************************************************************************/

/*****************************************************************************
* RCS INFORMATION:
*
*       $RCSfile: fastaWriter.h,v $
*       $Author: erobert3 $        $Locker:  $             $State: Exp $
*       $Revision: 1.1.2.2 $           $Date: 2005/01/05 22:17:12 $
*
******************************************************************************/

// $Id: fastaWriter.h,v 1.1.2.2 2005/01/05 22:17:12 erobert3 Exp $

#ifndef FASTAWRITER_H
#define FASTAWRITER_H

/**
 * This class writes FASTA files from various sequence sources.
 */ 
class FASTAWriter {

    public:
        FASTAWriter() {}
        ~FASTAWriter() {}
        
        int writeSequenceAlignment(char* filename, SequenceAlignment* alignment, int lineLength=60);  
};

#endif