set output_root "output/%02d/alad" set namd_config_file "alad_base.namd" set bincoor_file "../prep/alad_%02d.coor" set colvars_file "colvars_%02d.conf" set temperature 300 set num_iter 300 set num_images 20 set num_swarms 10 set num_swarm_steps 20 set num_equil_steps 50000 set smooth_param 0.1 set swarms_force_constant 0.3