# NAMD CONFIGURATION FILE FOR DECALANIN

# protocol params
numsteps	400
timestep        0.5
stepspercycle   1


# initial config
coordinates	./alanin.coor
velocities      ./alanin.vel
structure       ./alanin.psf
parameters      ./alanin.params

seed		12345

# output params
outputname      baseline_output

# force field params
exclude		scaled1-4
1-4scaling	1.0
switching	on
switchdist	8.0
cutoff		12.0
pairlistdist	13.5
margin		0.0

# restart params
restartname     baseline_coords
restartfreq     10
restartsave     yes