Commands to manage individual collective variables

• cv colvar name addforce <force>
  Apply the given force onto this colvar and return the same
  Parameters
  force : float or array - Applied force; must match colvar dimensionality
• cv colvar name cvcflags <flags>
  Enable or disable individual components by setting their active flags
  Parameters
  flags : integer array - Zero/nonzero value disables/enables the CVC
• cv colvar name delete
  Delete this colvar, along with all biases that depend on it
• cv colvar name get <feature>
  Get the value of the given feature for this colvar
  Parameters
  feature : string - Name of the feature
• cv colvar name getappliedforce
  Return the total of the forces applied to this colvar
• cv colvar name getatomgroups
  Return the atom indices used by this colvar as a list of lists
• cv colvar name getatomids
  Return the list of atom indices used by this colvar
• cv colvar name getconfig
  Return the configuration string of this colvar
• cv colvar name getgradients
  Return the atomic gradients of this colvar
• cv colvar name gettotalforce
  Return the sum of internal and external forces to this colvar
• cv colvar name help [command]
  Get a help summary or the help string of one colvar subcommand
  Parameters
  command : string - Get the help string of this specific command (optional)
• cv colvar name modifycvcs <confs>
  Modify configuration of individual components by passing string arguments
  Parameters
  confs : sequence of strings - New configurations; empty strings are skipped
• cv colvar name run_ave
  Get the current running average of the value of this colvar
• cv colvar name set <feature> <value>
  Set the given feature of this colvar to a new value
  Parameters
  feature : string - Name of the feature
  value : string - String representation of the new feature value
• cv colvar name state
  Print a string representation of the feature state of this colvar
• cv colvar name type
  Get the type description of this colvar
• cv colvar name update
  Recompute this colvar and return its up-to-date value
• cv colvar name value
  Get the current value of this colvar
• cv colvar name width
  Get the width of this colvar