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namdbinplugin.c File Reference

#include <stdlib.h>
#include <stdio.h>
#include <string.h>
#include <limits.h>
#include "molfile_plugin.h"

Go to the source code of this file.

Compounds

struct  namdbinhandle

Functions

void * open_namdbin_read (const char *path, const char *filetype, int *natoms)
int read_next_timestep (void *v, int natoms, molfile_timestep_t *ts)
void close_file_read (void *v)
void * open_namdbin_write (const char *path, const char *filetype, int natoms)
int write_timestep (void *v, const molfile_timestep_t *ts)
void close_file_write (void *v)
VMDPLUGIN_API int VMDPLUGIN_init ()
VMDPLUGIN_API int VMDPLUGIN_register (void *v, vmdplugin_register_cb cb)
VMDPLUGIN_API int VMDPLUGIN_fini ()

Variables

molfile_plugin_t plugin

Function Documentation

void close_file_read (  void *    v )  [static]
 

Definition at line 142 of file namdbinplugin.c.

References namdbinhandle::fd, and namdbinhandle::xyz.

void close_file_write (  void *    v )  [static]
 

Definition at line 196 of file namdbinplugin.c.

References namdbinhandle::fd.

void* open_namdbin_read (  const char *    path,
const char *    filetype,
int *    natoms
)  [static]
 

Definition at line 40 of file namdbinplugin.c.

References namdbinhandle::fd, namdbinhandle::numatoms, namdbinhandle::wrongendian, and namdbinhandle::xyz.

void* open_namdbin_write (  const char *    path,
const char *    filetype,
int    natoms
)  [static]
 

Definition at line 150 of file namdbinplugin.c.

References namdbinhandle::fd, and namdbinhandle::numatoms.

int read_next_timestep (  void *    v,
int    natoms,
molfile_timestep_t *    ts
)  [static]
 

Definition at line 95 of file namdbinplugin.c.

References molfile_timestep_t::coords, namdbinhandle::fd, MOLFILE_ERROR, MOLFILE_SUCCESS, namdbinhandle::numatoms, namdbinhandle::wrongendian, and namdbinhandle::xyz.

VMDPLUGIN_API int VMDPLUGIN_fini (  void    ) 
 

Definition at line 237 of file namdbinplugin.c.

References VMDPLUGIN_API, and VMDPLUGIN_SUCCESS.

VMDPLUGIN_API int VMDPLUGIN_init (  void    ) 
 

Definition at line 228 of file namdbinplugin.c.

References VMDPLUGIN_API, and VMDPLUGIN_SUCCESS.

VMDPLUGIN_API int VMDPLUGIN_register (  void *    v,
vmdplugin_register_cb    cb
) 
 

Definition at line 232 of file namdbinplugin.c.

References VMDPLUGIN_API, vmdplugin_register_cb, and VMDPLUGIN_SUCCESS.

int write_timestep (  void *    v,
const molfile_timestep_t *    ts
)  [static]
 

Definition at line 167 of file namdbinplugin.c.

References molfile_timestep_t::coords, namdbinhandle::fd, MOLFILE_ERROR, MOLFILE_SUCCESS, and namdbinhandle::numatoms.

Variable Documentation

molfile_plugin_t plugin [static]
 

Initial value:

 {
  vmdplugin_ABIVERSION,         
  MOLFILE_PLUGIN_TYPE,          
  "namdbin",                    
  "NAMD Binary Coordinates",    
  "James Phillips, Justin Gullingsrud",  
  0,                            
  1,                            
  VMDPLUGIN_THREADSAFE,         
  "coor",                       
  open_namdbin_read,
  0,
  0,
  read_next_timestep,
  close_file_read,
  open_namdbin_write,
  0,
  write_timestep,
  close_file_write
}

Definition at line 207 of file namdbinplugin.c.

Generated on Wed Mar 22 13:15:34 2006 for VMD Plugins (current) by doxygen1.2.14 written by Dimitri van Heesch, © 1997-2002