One Letter Sequence 1.0 ------------------------ REQUIREMENTS: VMD Versions 1.8 DESCRIPTION: Prints the sequence of residues making up a picked protein, with one letter representing each residue. This format is useful as input to secondary structure prediction programs, etc. To use this script, click on an atom of the molecule you wish to find the sequence of. Then type 'write_picked_sequence.' No arguments to the procedure need to be specified This only works for proteins, and doesn't take into account some "non-standard" residue names. PROCEDURES: write_picked_sequence - no arguments, after picking an atom, this procedure will give you a one letter per residue identification of the sequence EXAMPLE OUTPUT: for the protein pti RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA DOWNLOAD FILE: one_letter_sequence.tcl AUTHOR: Andrew Dalke (dalke@ks.uiuc.edu)