CVS

Log history

No file revisions.

Unchanged

.cvsignore

ANARIDisplayDevice.C

ANARIDisplayDevice.h

ANARIRenderer.C

ANARIRenderer.h

Animation.C

Animation.h

ArtDisplayDevice.C

ArtDisplayDevice.h

Atom.h

AtomColor.C

AtomColor.h

AtomLexer.C

AtomLexer.l

AtomParser.C

AtomParser.h

AtomParser.y

AtomRep.C

AtomRep.h

AtomSel.C

AtomSel.h

Axes.C

Axes.h

BaseMolecule.C

BaseMolecule.h

Benchmark.C

Benchmark.h

BondSearch.C

BondSearch.h

CUDAAccel.C

CUDAAccel.h

CUDABench.cu

CUDAClearDevice.cu

CUDADispCmds.cu

CUDAFastPBC.cu

CUDAGaussianBlur.cu

CUDAGaussianBlur.h

CUDAKernels.h

CUDAMDFF.cu

CUDAMDFF.h

CUDAMarchingCubes.cu

CUDAMarchingCubes.h

CUDAMeasureQCP.cu

CUDAMeasureQCP.h

CUDAMeasureRDF.cu

CUDAOrbital.cu

CUDAOrbital.h

CUDAParPrefixOps.cu

CUDAParPrefixOps.h

CUDAQuickSurf.cu

CUDAQuickSurf.h

CUDASegmentation.cu

CUDASegmentation.h

CUDASort.cu

CUDASort.h

CUDASpatialSearch.cu

CUDASpatialSearch.h

CUDAUtil.cu

CUDAVolCPotential.cu

CUDAVolMapCreateILS.cu

CUDAWatershed.cu

CUDAWatershed.h

CUDAWrapNVML.cu

CUDAWrapNVML.h

CaveDisplayDevice.C

CaveDisplayDevice.h

CaveRoutines.C

CaveRoutines.h

CaveScene.C

CaveScene.h

CmdAnimate.C

CmdAnimate.h

CmdColor.C

CmdColor.h

CmdDisplay.C

CmdDisplay.h

CmdIMD.C

CmdIMD.h

CmdLabel.C

CmdLabel.h

CmdMaterial.C

CmdMaterial.h

CmdMenu.C

CmdMenu.h

CmdMol.C

CmdMol.h

CmdPlugin.h

CmdRender.C

CmdRender.h

CmdTrans.C

CmdTrans.h

ColorFltkMenu.C

ColorFltkMenu.h

ColorInfo.C

ColorScaleTables.h

Command.h

CommandQueue.C

CommandQueue.h

CoorData.h

CoorPluginData.C

CoorPluginData.h

DepthSortObj.h

DispCmds.C

DispCmds.h

DisplayDevice.C

DisplayDevice.h

DisplayFltkMenu.C

DisplayFltkMenu.h

DisplayRocker.C

DisplayRocker.h

Displayable.C

Displayable.h

DrawForce.C

DrawForce.h

DrawMolItem.C

DrawMolItem.h

DrawMolItem2.C

DrawMolItemMSMS.C

DrawMolItemNanoShaper.C

DrawMolItemOrbital.C

DrawMolItemQuickSurf.C

DrawMolItemRibbons.C

DrawMolItemRings.C

DrawMolItemSolventPoints.data

DrawMolItemSurface.C

DrawMolItemVolume.C

DrawMolecule.C

DrawMolecule.h

DrawRingsUtils.C

DrawRingsUtils.h

FPS.C

FPS.h

FastPBC.C

FastPBC.h

FileChooserFltkMenu.C

FileChooserFltkMenu.h

FileRenderList.C

FileRenderList.h

FileRenderer.C

FileRenderer.h

FltkOpenGLDisplayDevice.C

FltkOpenGLDisplayDevice.h

Fragment.h

FreeVRDisplayDevice.C

FreeVRDisplayDevice.h

FreeVRRoutines.C

FreeVRRoutines.h

FreeVRScene.C

FreeVRScene.h

GaussianBlur.C

GaussianBlur.h

GelatoDisplayDevice.C

GelatoDisplayDevice.h

GeometryAngle.C

GeometryAngle.h

GeometryAtom.C

GeometryAtom.h

GeometryBond.C

GeometryBond.h

GeometryDihedral.C

GeometryDihedral.h

GeometryFltkMenu.C

GeometryFltkMenu.h

GeometryList.C

GeometryList.h

GeometryMol.C

GeometryMol.h

GeometrySpring.C

GeometrySpring.h

GraphLayout.C

GraphLayout.h

GraphicsFltkMenu.C

GraphicsFltkMenu.h

GraphicsFltkReps.h

HMDMgr.C

HMDMgr.h

Hershey.C

Hershey.h

IMDMgr.C

IMDMgr.h

IMDSim.C

IMDSim.h

IMDSimBlocking.C

IMDSimBlocking.h

IMDSimThread.C

IMDSimThread.h

ImageIO.C

ImageIO.h

Inform.C

Inform.h

Isocontour.C

Isocontour.h

Isosurface.C

Isosurface.h

JRegex.C

JRegex.h

JString.C

JString.h

LibGelatoDisplayDevice.C

LibGelatoDisplayDevice.h

LibTachyonDisplayDevice.C

LibTachyonDisplayDevice.h

MDFF.C

MDFF.h

MSMSInterface.C

MSMSInterface.h

MainFltkMenu.C

MainFltkMenu.h

Makedata.depend

Makefile.lexyacc

Makefile.optixshader

MaterialFltkMenu.C

MaterialFltkMenu.h

MaterialList.C

MaterialList.h

Matrix4.C

Matrix4.h

MayaDisplayDevice.C

MayaDisplayDevice.h

Measure.C

Measure.h

MeasureCluster.C

MeasurePBC.C

MeasureQCP.C

MeasureRDF.C

MeasureSurface.C

MeasureSymmetry.C

MeasureSymmetry.h

MeasureVolInterior.C

MeasureVolInterior.h

MobileButtons.C

MobileButtons.h

MobileInterface.C

MobileInterface.h

MobileTracker.C

MobileTracker.h

MolBrowser.C

MolBrowser.h

MolFilePlugin.C

MolFilePlugin.h

Molecule.C

Molecule.h

MoleculeGraphics.C

MoleculeGraphics.h

MoleculeList.C

MoleculeList.h

Mouse.C

Mouse.h

NVENCMgr.C

NVENCMgr.h

NameList.h

NanoShaperInterface.C

NanoShaperInterface.h

OSPRay2DisplayDevice.C

OSPRay2DisplayDevice.h

OSPRay2Renderer.C

OSPRay2Renderer.h

OSPRayDisplayDevice.C

OSPRayDisplayDevice.h

OSPRayRenderer.C

OSPRayRenderer.h

OpenCLKernels.h

OpenCLOrbital.C

OpenCLUtils.C

OpenCLUtils.h

OpenCLVolCPotential.C

OpenGLCache.C

OpenGLCache.h

OpenGLDisplayDevice.C

OpenGLDisplayDevice.h

OpenGLExtensions.C

OpenGLExtensions.h

OpenGLPbufferDisplayDevice.C

OpenGLPbufferDisplayDevice.h

OpenGLRenderer.C

OpenGLRenderer.h

OpenGLShader.C

OpenGLShader.h

OpenGLStipples.h

OptiXDisplayDevice.C

OptiXDisplayDevice.h

OptiXRenderer.C

OptiXRenderer.h

OptiXShaders.cu

OptiXShaders.h

Orbital.C

Orbital.h

OrbitalJIT.C

OrbitalJIT.h

Orbital_AVX2.C

Orbital_AVX512.C

Orbital_AVX512ER.C

Orbital_NEON.C

Orbital_SVE.C

POV3DisplayDevice.C

POV3DisplayDevice.h

PSDisplayDevice.C

PSDisplayDevice.h

P_Buttons.C

P_Buttons.h

P_CaveButtons.C

P_CaveButtons.h

P_CaveTracker.C

P_CaveTracker.h

P_CmdTool.C

P_CmdTool.h

P_Feedback.h

P_FreeVRButtons.C

P_FreeVRButtons.h

P_FreeVRTracker.C

P_FreeVRTracker.h

P_GrabTool.C

P_GrabTool.h

P_JoystickButtons.C

P_JoystickButtons.h

P_JoystickTool.C

P_JoystickTool.h

P_PinchTool.C

P_PinchTool.h

P_PrintTool.C

P_PrintTool.h

P_RotateTool.C

P_RotateTool.h

P_SensorConfig.C

P_SensorConfig.h

P_Tool.C

P_Tool.h

P_Tracker.C

P_Tracker.h

P_TugTool.C

P_TugTool.h

P_UIVR.C

P_UIVR.h

P_VRPNButtons.C

P_VRPNButtons.h

P_VRPNFeedback.C

P_VRPNFeedback.h

P_VRPNTracker.C

P_VRPNTracker.h

ParseTree.C

ParseTree.h

PeriodicTable.C

PeriodicTable.h

PhoneButtons.C

PhoneButtons.h

PhoneTracker.C

PhoneTracker.h

PickList.C

PickList.h

PickMode.h

PickModeAddBond.C

PickModeAddBond.h

PickModeCenter.C

PickModeCenter.h

PickModeForce.C

PickModeForce.h

PickModeList.C

PickModeList.h

PickModeMolLabel.C

PickModeMolLabel.h

PickModeMove.C

PickModeMove.h

PickModeUser.C

PickModeUser.h

Pickable.h

PlainTextInterp.C

PlainTextInterp.h

PluginMgr.C

PluginMgr.h

ProfileHooks.h

PythonTextInterp.C

PythonTextInterp.h

QMData.C

QMData.h

QMTimestep.C

QMTimestep.h

QuickSurf.C

QuickSurf.h

QuickSurf_AVX2.C

QuickSurf_NEON.C

R3dDisplayDevice.C

R3dDisplayDevice.h

RadianceDisplayDevice.C

RadianceDisplayDevice.h

RayShadeDisplayDevice.C

RayShadeDisplayDevice.h

RenderFltkMenu.C

RenderFltkMenu.h

RenderManDisplayDevice.C

RenderManDisplayDevice.h

Residue.h

ResizeArray.h

SDLOpenGLDisplayDevice.C

STLDisplayDevice.C

STLDisplayDevice.h

SaveTrajectoryFltkMenu.C

SaveTrajectoryFltkMenu.h

ScaleSpaceFilter.C

ScaleSpaceFilter.h

Scene.C

Scene.h

Segmentation.C

Segmentation.h

SelectionBuilder.C

SelectionBuilder.h

SmallRing.h

SmallRingLinkages.h

SnapshotDisplayDevice.C

SnapshotDisplayDevice.h

SortableArray.h

Spaceball.C

Spaceball.h

SpaceballButtons.C

SpaceballButtons.h

SpaceballTracker.C

SpaceballTracker.h

SpatialSearch.C

SpatialSearch.h

SpringTool.C

SpringTool.h

Stack.h

Stage.C

Stage.h

Stride.C

Stride.h

Surf.C

Surf.h

SymbolTable.C

SymbolTable.h

TachyonDisplayDevice.C

TachyonDisplayDevice.h

TclCommands.C

TclCommands.h

TclFastPBC.C

TclGraphLayout.C

TclGraphics.C

TclMDFF.C

TclMDFF.h

TclMeasure.C

TclMolInfo.C

TclSegmentation.C

TclTextInterp.C

TclTextInterp.h

TclVec.C

TclVolMap.C

TclVoltool.C

TextEvent.h

TextInterp.h

Timestep.C

Timestep.h

ToolFltkMenu.C

ToolFltkMenu.h

UIObject.C

UIObject.h

UIText.C

UIText.h

VMDApp.C

VMDApp.h

VMDCollab.C

VMDCollab.h

VMDDir.C

VMDDir.h

VMDDisplayList.C

VMDDisplayList.h

VMDFltkMenu.C

VMDFltkMenu.h

VMDMPI.C

VMDMPI.h

VMDMenu.C

VMDMenu.h

VMDQuat.C

VMDQuat.h

VMDTitle.C

VMDTitle.h

VMDTkMenu.C

VMDTkMenu.h

VMDTkinterMenu.C

VMDTkinterMenu.h

VRJugglerApp.C

VRJugglerApp.h

VRJugglerButtons.C

VRJugglerButtons.h

VRJugglerDisplayDevice.C

VRJugglerDisplayDevice.h

VRJugglerRoutines.C

VRJugglerRoutines.h

VRJugglerScene.C

VRJugglerScene.h

VRJugglerSharedData.C

VRJugglerSharedData.h

VRJugglerTracker.C

VRJugglerTracker.h

VideoStream.C

VideoStream.h

VolCPotential.C

VolCPotential.h

VolMapCreate.C

VolMapCreate.h

VolMapCreateILS.C

Voltool.C

Voltool.h

VolumeTexture.C

VolumeTexture.h

VolumetricData.C

VolumetricData.h

Vrml2DisplayDevice.C

Vrml2DisplayDevice.h

VrmlDisplayDevice.C

VrmlDisplayDevice.h

WKFThreads.C

WKFThreads.h

WKFUtils.C

WKFUtils.h

Watershed.C

Watershed.h

WavefrontDisplayDevice.C

WavefrontDisplayDevice.h

Win32Joystick.C

Win32Joystick.h

Win32OpenGLDisplayDevice.C

Win32ftp.C

Win32ftp.h

X3DDisplayDevice.C

X3DDisplayDevice.h

androidvmdstart.C

androidvmdstart.h

c_compiler.c

c_compiler.h

cmd_animate.C

cmd_collab.C

cmd_color.C

cmd_display.C

cmd_imd.C

cmd_label.C

cmd_material.C

cmd_menu.C

cmd_mobile.C

cmd_mol.C

cmd_mouse.C

cmd_parallel.C

cmd_plugin.C

cmd_profile.C

cmd_render.C

cmd_spaceball.C

cmd_tool.C

cmd_trans.C

cmd_user.C

cmd_util.C

cmd_videostream.C

cmd_vmdbench.C

colvar.C

colvar.h

colvar_UIestimator.h

colvar_arithmeticpath.h

colvar_geometricpath.h

colvar_neuralnetworkcompute.C

colvar_neuralnetworkcompute.h

colvaratoms.C

colvaratoms.h

colvarbias.C

colvarbias.h

colvarbias_abf.C

colvarbias_abf.h

colvarbias_alb.C

colvarbias_alb.h

colvarbias_histogram.C

colvarbias_histogram.h

colvarbias_histogram_reweight_amd.C

colvarbias_histogram_reweight_amd.h

colvarbias_meta.C

colvarbias_meta.h

colvarbias_restraint.C

colvarbias_restraint.h

colvarcomp.C

colvarcomp.h

colvarcomp_alchlambda.C

colvarcomp_angles.C

colvarcomp_apath.C

colvarcomp_combination.C

colvarcomp_coordnums.C

colvarcomp_distances.C

colvarcomp_gpath.C

colvarcomp_neuralnetwork.C

colvarcomp_protein.C

colvarcomp_rotations.C

colvarcomp_volmaps.C

colvardeps.C

colvardeps.h

colvargrid.C

colvargrid.h

colvargrid_def.h

colvarmodule.C

colvarmodule.h

colvarmodule_refs.h

colvarmodule_utils.h

colvarparams.C

colvarparams.h

colvarparse.C

colvarparse.h

colvarproxy.C

colvarproxy.h

colvarproxy_io.C

colvarproxy_io.h

colvarproxy_replicas.C

colvarproxy_system.C

colvarproxy_system.h

colvarproxy_tcl.C

colvarproxy_tcl.h

colvarproxy_vmd.C

colvarproxy_vmd.h

colvarproxy_vmd_version.h

colvarproxy_volmaps.C

colvarproxy_volmaps.h

colvars_files.pl

colvars_version.h

colvarscript.C

colvarscript.h

colvarscript_commands.C

colvarscript_commands.h

colvarscript_commands_bias.C

colvarscript_commands_bias.h

colvarscript_commands_colvar.C

colvarscript_commands_colvar.h

colvartypes.C

colvartypes.h

colvarvalue.C

colvarvalue.h

fitrms.c

fitrms.h

forms_ui.fd

frame_selector.C

frame_selector.h

glwin.c

glwin.h

hash.c

hash.h

imd.C

imd.h

inthash.c

inthash.h

intstack.c

intstack.h

linenoise.c

linenoise.h

macosxvmdstart.C

macosxvmdstart.h

msmpot.c

msmpot.h

msmpot_compute.c

msmpot_cubic.c

msmpot_cuda.cu

msmpot_cuda.h

msmpot_cuda_latcut.cu

msmpot_cuda_shortrng.cu

msmpot_internal.h

msmpot_setup.c

nr_jacobi.C

nr_jacobi.h

pcre.c

pcre.h

pcreinternal.h

pcretables.h

ptrstack.c

ptrstack.h

py_animate.C

py_atomsel.C

py_axes.C

py_color.C

py_commands.C

py_commands.h

py_display.C

py_graphics.C

py_imd.C

py_label.C

py_material.C

py_measure.C

py_menu.C

py_molecule.C

py_molrep.C

py_mouse.C

py_numeric.C

py_render.C

py_selection.C

py_topo.C

py_trans.C

py_vmd.C

tcl_commands.C

tcl_commands.h

util_simd.C

util_simd_AVX.C

util_simd_AVX2.C

util_simd_NEON.C

util_simd_SVE.C

utilities.C

utilities.h

vmd.C

vmd.h

vmdconsole.c

vmdconsole.h

vmddlopen.c

vmddlopen.h

vmdfsinfo.c

vmdfsinfo.h

vmdmac.r

vmdmain.C

vmdsock.c

vmdsock.h

win32vmdstart.c

win32vmdstart.h

y.tab.h