Re: 2 pdb files

From: Peter Freddolino (petefred_at_ks.uiuc.edu)
Date: Fri May 09 2008 - 07:15:00 CDT

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Certainly. Have you read the namd tutorial? You can follow the same
procedures , simply building more than one protein chain (with separate
pdb files).
Best,
Peter

Christine Horejs DI wrote:
> Dear all,
>
> Is it possible to simulate the interaction of more identical
> protein-monomers (for example proteins that form a lattice)? Maybe in
> a unit cell?
> I would like to make one pdb-file with one monomer constraint and one
> pdb-file with the second monomer, that can flexibly move! Both
> pdb-files should
> be part of the simulation! Is this possible???
>
> Thank You all for Your help,
> have a noce day,
> greetings,
> Christine

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