From: İmren Bayıl (ib57001_at_student.gaziantep.edu.tr)
Date: Thu Feb 24 2022 - 16:48:23 CST
I want to run my md simulation using slurum.But I am getting error.my bash
file is below
written error is
/tmp/slurmd/job8535438/slurm_script: line 21: /truba/home/ibayil: Is a
directory
ibayil is my account in slurm.How to fix this error ?
#!/bin/bash
#SBATCH -p hamsi
#SBATCH -J namd-multicore-test
#SBATCH -N 1
#SBATCH -n 28
#SBATCH --time=03-00:00:00
#SBATCH --output=out_slurm/slurm-%j.out
#SBATCH --error=error_slurm/slurm-%j.err
#tum kuyruklar icin
module load centos7.3/app/namd/2017-11-10-multicore
#cuda kuyrugu icin
#module load centos7.3/app/namd/2017-11-10-multicore-cuda
echo "SLURM_NODELIST $SLURM_NODELIST"
echo "NUMBER OF CORES $SLURM_NTASKS"
$NAMD_DIR/namd2 +p $SLURM_NTASKS +idlepoll water.namd
This archive was generated by hypermail 2.1.6 : Tue Dec 13 2022 - 14:32:44 CST