Re: namd3 on centos 6

From: Victor Kwan (vkwan8_at_uwo.ca)
Date: Sun Sep 20 2020 - 13:07:50 CDT

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By the time NAMD 3 releases, CentOS 6 will probably be end-of-life. It is
time for an upgrade and CentOS 8 looks better than ever.

On Sat, Sep 19, 2020 at 8:49 AM Boyan Bonev <Boyan.Bonev_at_nottingham.ac.uk>
wrote:

> Just downloaded NAMD3 alpha CUDA to test on a multi-GPGPU system and
> discovered that NAMD3 requires a higher version of the libraries:
>
> /lib64/libc.so.6: version `GLIBC_2.14' not found (required by namd3)
>
> /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.14' not found (required by
> namd3)
>
> /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.19' not found (required by
> namd3)
>
> /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.18' not found (required by
> namd3)
>
> /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.15' not found (required by
> namd3)
>
> Can NAMD3 run on centos 6 or does it require lentos 7? The general view
> seems to be that the libraries cannot be upgraded but the OS should be
> upgraded, instead.
>
> Best wishes,
>
> Dr Boyan Bonev, Senior Tutor in Biochemistry
> Biomembrane NMR & DNP spectroscopy
> School of Life Sciences
>
> University of Nottingham
>
> Queen’s Medical Centre
>
> Nottingham NG7 2UH, UK
>
> [image: twitter]
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