Re: namd3 on centos 6

From: Pratik Narain Srivastava (pratik.narain_at_gmail.com)
Date: Sat Sep 19 2020 - 09:04:24 CDT

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Just my two cents
I personally have never understood the appeal for outdated software in the
name of stability. If course you should update to the latest available
version of centos. Or better, run an Ubuntu LTS version. You are after all
trying to test an alpha level software written to take advantage of latest
hardware and software technologies on an ancient os.

On Sat, Sep 19, 2020, 6:21 PM Boyan Bonev <Boyan.Bonev_at_nottingham.ac.uk>
wrote:

> Just downloaded NAMD3 alpha CUDA to test on a multi-GPGPU system and
> discovered that NAMD3 requires a higher version of the libraries:
>
> /lib64/libc.so.6: version `GLIBC_2.14' not found (required by namd3)
>
> /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.14' not found (required by
> namd3)
>
> /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.19' not found (required by
> namd3)
>
> /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.18' not found (required by
> namd3)
>
> /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.15' not found (required by
> namd3)
>
> Can NAMD3 run on centos 6 or does it require lentos 7? The general view
> seems to be that the libraries cannot be upgraded but the OS should be
> upgraded, instead.
>
> Best wishes,
>
> Dr Boyan Bonev, Senior Tutor in Biochemistry
> Biomembrane NMR & DNP spectroscopy
> School of Life Sciences
>
> University of Nottingham
>
> Queen’s Medical Centre
>
> Nottingham NG7 2UH, UK
>
> [image: twitter]
> <https://urldefense.proofpoint.com/v2/url?u=https-3A__twitter.com_biomembranenmr&d=DwMF-g&c=OCIEmEwdEq_aNlsP4fF3gFqSN-E3mlr2t9JcDdfOZag&r=jUfnSyKkfkyVRBIUzlG1GSGGZAZGcznwr8YliSSCjPc&m=f2k7pupr5fmenaKc0glXLF049j1Pb8ZdGSK5XvDdGsg&s=BFflxFSN772EpbEAZECF09cV169T3Fa3YAaV9SJFxCI&e=>
>
>
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