From: Paula Mihaljevic-Juric (paula.mihaljevic-juric_at_polytechnique.edu)
Date: Wed Oct 02 2019 - 09:57:40 CDT
Dear NAMD users,
I would like to understand how does NAMD read radius used for GBIS and is it possible to change a value of a specific atom (like ZN2+ or MG2+)?
For example, in AMBER there is a statement to change a default value, whereas in CHARMM I am able to directly change the GB radius in the parameter file.
I would appreciate someones help.
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