MD without water - Reg

From: Mani Kandan (
Date: Mon May 13 2019 - 13:11:31 CDT

Hello all,
           I want to simulate the system containing ions+silicon nitride
nanopore to understand the effect of water on ion transport through the
nanopore. In this MD run, the ions are attracted to each other and form a
cluster of atoms. How to avoid cluster formation of ions? Is any literature
available for MD without water?

Is it good to apply small force between ions using tclforce option to avoid
cluster formation?

Kindly advise in this regard. Or any other possible methods to do this.

With regards

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