Re: NAMD_CUDA

From: Jim Phillips (jim_at_ks.uiuc.edu)
Date: Tue Dec 20 2016 - 23:30:12 CST

This is fixed in the nightly build. -Jim

On Fri, 16 Dec 2016, Sana Saeed wrote:

> hi
> i am simulating protein protein complex using NAMD_CUDA, the simulation is 20ns but with some of complexes i am getting this error, i think it is related to CUDA. if anyone knows what this is about kindly help me. I shall be very thankful.
>
> Following is the Error i got,
> FATAL ERROR: CudaTileListKernel::sortTileLists, numTileListsDst = 0
> [4] Stack Traceback:
> [4:0] [0x1290075]
> [4:1] [0x5b5d6d]
> [4:2] [0x10954b2]
> [4:3] [0x1096711]
> [4:4] [0xb0748f]
> [4:5] [0x12a561d]
> [4:6] [0x1299752]
> [4:7] [0x128fdaa]
> [4:8] [0x128d2c3]
> [4:9] +0x8184 [0x2b456b81c184]
> [4:10] clone+0x6d [0x2b456c75837d]
> [4] Stack Traceback:
> [4:0] [0x1290755]
> [4:1] [0x129002e]
> [4:2] [0x1290075]
> [4:3] [0x5b5d6d]
> [4:4] [0x10954b2]
> [4:5] [0x1096711]
> [4:6] [0xb0748f]
> [4:7] [0x12a561d]
> [4:8] [0x1299752]
> [4:9] [0x128fdaa]
> [4:10] [0x128d2c3]
> [4:11] +0x8184 [0x2b456b81c184]
> [4:12] clone+0x6d [0x2b456c75837d]
>
>
> Sana Saeed Khan,
> Research Assistant
> Chemoinformatics Lab
> Graduate Student, MS bioinfo
> Department of Bioinformatics
> Soongsil University, Seoul, South Korea.
>

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